YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56697943, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAALQQTEG GAGGRRRGRR RGRARPMSEI NVTPFVDVML VLLIIFMVAA PLMTVGVPVE  60
   61 LPKTAAGALP SDDEEPLTVT VTAEGEVQIQ TTAVPRDELV ARLRAIAAER SSDRVYLRAD 120
  121 GGIPYAQVMQ VMGALNAGGF SNVGLVTDTG GPRLDSGGE

Type	Start	End	Confidence
Cytoplasmic	1	29	0.87
Transmembrane Helix	30	53	0.86
Non-Cytoplasmic	54	159	0.81