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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56679674, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.33
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLGNARNIA FWVVLFLLIL ALFNLFSGSG GTLQSQEKTY SEFVSAVDEG NVTKVILDGE  60
   61 QIRYRTSDGR DFVTIKPGDA EVTTLLIDKN IPVRAEKQQQ SGFQSFIITL LPFLLLIGVW 120
  121 VYFMNRMQGG GRGGAMGFGK SKAKMLTEKH GRVTFDDVAG IDEAKEELEE IVEFLRNPQK 180
  181 FSRLGGKIPK GALLVGPPGT GKTLLARAIA GEAGVPFFTI SGSDFVEMFV GVGASRVRDM 240
  241 FEQAKKNAPC IVFIDEIDAV GRHRGAGYGG GNDEREQTLN QLLVEMDGFE ANEGVIILAA 300
  301 TNRKDVLDPA LLRPGRFDRN VTVGNPDIKG REKILGVHAR KTPLGPDVDL RIIARGTPGF 360
  361 SGADLANLVN EAALMAARVG RRFVTMEDFE NAKDKVMMGA ERRSMVLTQD QKEKTAYHEA 420
  421 GHAVVGLALP MCDPVYKATI IPRGGALGMV VSLPEMDRLN WHRDECQQKL AMTMAGKAAE 480
  481 ILKYGEDHVS NGPAGDIQQA SQLARAMVMR WGMSDKVGNI DYAEAHEGYS GNTAGFSVSA 540
  541 HTKELIEEEV KRFIQQGYDQ AHAILTERRE DWDRLAQGLL EYETLTGEEI KRVMKGEPPH 600
  601 AGDDEDQGTD QGNAASVTAI PKTKPKAPPA GGMEPEPTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle