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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56697882, gi|...
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFNKRTDEL AGGSLPGHVL AAADHARSGS AMDRREFLAL ASVFGATAAT AYGMLGMAAP  60
   61 AQAATPRRGG TLRLEVGVHA LKDTRTMDFA AMSMVASNWL EYLVEYNNDG TFKPRLLDSW 120
  121 EVNADATEYT LKVRKGVTWN NGDAFTAQDV ARNIERWCDA EVEGNSMASR MNSLVDPETK 180
  181 KAAAGAITVV DDETVKLTCR SSDITIIPGL ADYPALVVHE SYTPETMLTN PVGTGPYKPV 240
  241 EFEVGVRAAV ERNTEHAWWG EGTGAWLDRI EFLDYGTDAS AVLSAVEADE IDVTYNTSGE 300
  301 YLELIEALGW HTSEIATGST VVIRANQQAE VNGQKPYADV RVRKALQMAV DNNVVLELAF 360
  361 NNNGKVAQNH HVAPVHPEYA DIGDPVHDPA GARALIEEAG MADFEHELIS IDGGFRKDTA 420
  421 DVVAIQLRDA GIKVKRTIMP GSTFWNDWTK YPFSITDWNH RPLGVQLYGI CYRSGQKWNE 480
  481 AGFANAEFDA LLDQAVAVAD PAKRSEITAK MEQIMIDEAV IIQPYWRSLF RQSREGVLNA 540
  541 EPHISFLPQL YKWGWA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle