YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56697777, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRIAFLAS DAPVAQTARA ALVGRYGNAA PRDAEVIVAL GGDGYMLRTL HSTQHLDVPV  60
   61 YGMNRGTIGF LMNEYAETSL LERLAAAEEE IINPLSMTAM DQAGQIHRAL AINEVSLLRA 120
  121 GPQAARLKIS IDGRLRLAEL VCDGALVATP AGSTAYNYSA HGPILPIGSD VLALTAIAAF 180
  181 RPRRWRGALL PKTAKVRFDV VDADKRPVMA DADSTSITDI DWVEIQSEPT IRHRILFDPG 240
  241 HGLEERLISE QFT

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	253	0.96