YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56697736, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQIWEITIA FFLIVSGVFG FVGSFGMIKL KDPMSRLHAP TKATTLGVGG VLIASILHSL  60
   61 TLEDHVSLHE LLITLFLFLT APVTALFIAK WHIHRHETPE SLPPTGGDGR WATHAVEPDD 120
  121 DTPEHTAN

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.93
Transmembrane Helix	7	28	0.94
Cytoplasmic	29	40	0.84
Transmembrane Helix	41	62	0.89
Non-Cytoplasmic	63	70	0.75
Transmembrane Helix	71	89	0.96
Cytoplasmic	90	128	0.93