YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56697734, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLRRIFPH PHLTLLLTLV WVLLANAPSL NSLLFGLILG IVIPFITQPY WPDRPKLRNW  60
   61 PMVVEYMLVV LWDIVMANVT VAGIILFKRD ADRKPAWISI PLELRSPEAI TVLAGTITMT 120
  121 PGTVSCDLSE RGLNLLVHCL DAPDPDAVRD EIKQRYERRL KEIFE

Type	Start	End	Confidence
Cytoplasmic	1	14	0.81
Transmembrane Helix	15	43	0.80
Non-Cytoplasmic	44	67	0.79
Transmembrane Helix	68	87	0.90
Cytoplasmic	88	165	0.79