YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56679443, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHLLILGGT TEANALARAV AETGLRATYS YAGRVEAPRD QPIPVRVGGF GGAAGLAEFI  60
   61 HTNNVTHLVD ATHPFAAQMS VNACAACTQT GTPLAALTRP AWQPGAGDNW RRVRDIAAAV 120
  121 AALEGVPQRV FLAVGRMHLE AFAAQPQHDY LLRLVDAPSD PLPLPKAQVV VSRGPFTKEG 180
  181 DKALMQKHKT QLVVSKNAGG TGARAKLDAA RDLGLPVLMI DRPVLPPRTE LATPTDVLRW 240
  241 LRHSGVNLGV

Type	Start	End	Confidence
Signal Peptide	1	17	0.83
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	250	0.99