YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56679428, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAKSAHAAL FAFSLRLGAI WCTPTRLARP DRRGKAIRTI GMADGTIPMN AKPTEEISVR  60
   61 EVFGIDTPML VKGFAERSDR VPEIDQTYKF DPDTTLAILA GFSHNRRVMV QGYHGTGKST 120
  121 HIEQVAARLN WPCVRVNLDS HISRIDLIGK DAIKLRDGKQ VTEFHEGILP WALRNPVAIV 180
  181 FDEYDAGRAD VMFVIQRVLE HDGKLTLLDQ NEIITPNPCF RLFATANTVG LGDTTGLYHG 240
  241 TQQINQAQMD RWSLVATLNY LSHDAETMIV LSKAPHYNTE KGRKQVSQMV TVADLTRTAF 300
  301 MNGDLSTVMS PRTVINWAQN AEIFRDVGYA FRLTFLNKCD ELERQTVAEF YQRCFDEELP 360
  361 ESAASTSLG

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	369	0.99