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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56697658, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIGTPKEIF EGENRVAMTP DSAVQLQKLG YDCAIESGAG AAAGFSDALY EAAGVEIIKT  60
   61 AAALWKEVDI VAKVRQPDAT ELKRLSKGKT LISFFNPAGN EDGMAAAKSK GANVIAMEMV 120
  121 PRISRAQKMD ALSSMANIAG YRAVIEAGNN FGRFFTGQVT AAGKVPPAKV LIVGAGVAGL 180
  181 AAIGTSTSLG AITYAFDVRP EVAEQVESMG AEFVYLDFEE EQQDGAATGG YASVSSPEFA 240
  241 AAQLAKFREL APEMDIVITT ALIPNREAPE LWTEDMVAAM KPGSVIVDLA AEKGGNCKLT 300
  301 VKDEKIVTEN GVTIIGYTDF PSRMAAQAST LYATNIRHMM TDLTPEKDGQ INHNMEDDVI 360
  361 RGATVTFEGD ITFPPPPPKV QAIAAKSKEK PKELTPEEKR AQEVAAFKAQ TKNQVTLLTV 420
  421 GGLLLLLVGL VAPASFMQHF IVFVLAVFVG FQVIWNVSHS LHTPLMAVTN AISSIIILGA 480
  481 LMQIGSGSFL VILLAGLSVF MAGINIFGGF LVTRRMLAMF QKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle