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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56697628, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTSKAMPA SEGFKANRAA HLDALAQIGA AAEAARLGGG EKSRARHESR GKMLPRRRVA  60
   61 NLLDAGSPFL EIGATAAFDM YDNAAPAAGV VAGIGRVEGQ EVMVVCNDAT VKGGTYYPMT 120
  121 VKKHLRAQEI AEENNLPCIY LVDSGGANLP NQDEVFPDRD HFGRIFYNQA RMSAKGIPQI 180
  181 AVVMGSCTAG GAYVPAMSDV TIIVKEQGTI FLAGPPLVKA ATGEVVSAED LGGGDVHTRL 240
  241 SGVADYLAED DAHALALARR AVRSLNRRKP LTVDWASPEE PAYDPEEILG VVPADLKTPY 300
  301 DIREVIARLV DGSRFDEFKP RFGETIVCGF AHLKGCPIGI IANNGVIFSE AAQKAAHFVE 360
  361 LCSQRKIPLV FLQNITGFMV GRKYENEGIA RHGAKMVTAV ATTAVPKITM LVGGSFGAGN 420
  421 YGMAGRAYQP RFLWTWPNSR ISVMGGEQAA GVLATVKRDG IERQGGSWSA EEEAEFKRPT 480
  481 LEMFERQSHP LYASARLWDD GIIDPRKSRD VLALSLSAAL NAPIEDTRFG VFRM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle