YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56697500, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLKPILAG AVALGLALPV AAQDRTGTLA KIDASGEIVI GHRESSVPFA YLDENQKPVG  60
   61 YSIDLCMKIV EAVSAELGKE LSIKYVPVNP KTRIALMANG TIDLECGSTT NNLTRQEQVE 120
  121 YLPTTFITGT KLMVRKGSGI SSVADLDGKA VALAQGTTNE RAVKAAIETM GLDVKVLPVR 180
  181 DHAEGMLSLE TDRVDVYATD HILLFGLIAK SKTPDAFEVV GDFLSFDPYA LMVRRDDSAF 240
  241 ELVGKKALAA VFRSGEIDAI YAKWFDPLGV GQTDLLKAAF QLNALPE

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	287	0.99