YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TPIS_RUEPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRKLAAGNW KMNGTGAALD ALEAIAGAHS AAAVDLLICP PATLLYRAAQ VAEGSRVRIG  60
   61 GQDCHAVTAG AHTGDISAMM LADAGASAVI LGHSERRADH GETDAQVCDK ARAALEAGLI 120
  121 AIICIGETLA QREAGQTLDV VCAQLAGSVP DGIDGTRVVV AYEPVWAIGT GLVPTLEQIA 180
  181 EVHDTLRQQL IGRFGSETAE AIRLLYGGSV KPGNAAEIFA VSNVDGALVG GASLTAADFS 240
  241 PIVSALEQAA G

Type	Start	End	Confidence
Signal Peptide	1	30	0.77
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	251	0.96