YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56697405, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMNIAVFGL GSMGYGMAQS CLRAGIGVHG FDVVAEQVAR FVKEGGSAAA FAEVARSLDA  60
   61 VVVVVLNAAQ VEQVLFGEDG VVTQMREGAV VLACATVPPE FAKEMERRCA EKDVLYLDAP 120
  121 ISGGSLKAAQ GRLGIMASGS AAAFAAAEPV LEATAETVFR LGDAAGAGSA MKAVNQLLAG 180
  181 VHIAAMAEAL TFGMTQGVAP DTFLDVISKC AGTSWMLENR APHVIAGDYA PHSQVNIWPK 240
  241 DLGIVLDAAK AAGFEAPITE TALARYRQAV DMGLGGEDDA AVAKVYAAQA KLTLPGAQS

Type	Start	End	Confidence
Signal Peptide	1	18	0.86
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	299	0.98