YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56679073, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLDTTAAVI TGGASGLGEA TARYFAEKGA QVTILDRDSA RGETVADEIG GHFAQTDVTS  60
   61 EDSVAAAIAH AMEKMGKITA AVNCAGIAYG IKTVGKEGAH PLDAFQRTID INLVGSFNVA 120
  121 RLAAVEMARN EPEPDGARGV IINTASIAAF DGQKGQVAYS ASKGGVVGMT LPMARDLAST 180
  181 GIRVMTIAPG IFLTPMLMGL PDEVRAGLAA DVPNPARLGD PREYGRLAGF IVEMGYLNGE 240
  241 VIRLDGALRM R

Type	Start	End	Confidence
Signal Peptide	1	20	0.50
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	251	0.87