YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56697268, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLFDLKGRR ALVTGSSMGI GYALARGLAQ AGASVVLNAR DGARLAGAAE QLRGQGIEVE  60
   61 TLVFDVTDAD AVRKAVDGFE AEIGQIDILV NNAGMQHRTP LEEFPVEAFD RLMRTNVNSA 120
  121 FYVGQAVARH MIGRGAGKIV NIASVQSALA RPGIAPYTAS KGAVSNLTKG MATDWARHGL 180
  181 NCNAIAPGYF DTPLNAALVA DPEFSAWLEK RTPAGRWGEV EELVGACIFL CSDAASFVNG 240
  241 HVLFVDGGIT ASL

Type	Start	End	Confidence
Signal Peptide	1	25	0.52
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	253	0.92