YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56678952, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLGSALFL AIYHYFPWVE RKFEATVMVS TYLLIGAIIF VEVFRRFVLN VQAPWSTTLP  60
   61 PFMFLIMTWA GCAYNVKLRT HLAFAEFRSN MPRPLQFLCL SLDALLWIGF AWIVIVTSTQ 120
  121 VAANSAANFQ ILLGTDNVLQ WWFLVSVPLS FILIAARALE NWLEDLRNYR DGSDLIAAVS 180
  181 IGAD

Type	Start	End	Confidence
Cytoplasmic	1	24	0.93
Transmembrane Helix	25	44	0.89
Non-Cytoplasmic	45	56	0.73
Transmembrane Helix	57	78	0.88
Cytoplasmic	79	96	0.92
Transmembrane Helix	97	116	0.95
Non-Cytoplasmic	117	137	0.88
Transmembrane Helix	138	159	0.91
Cytoplasmic	160	184	0.97