YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56678912, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIALLKRDLV LAFRAGGGFG LGLAFFLIVT VLVPFSVGPQ SALLSSIAPG VLWLGALLAC  60
   61 LLSLDRLLAL DWEDGTLDLL ATAPLPLEAV VTMKALAHWL TTGLPLVLAA PVLGVLLNLP 120
  121 TAGFVWLVVS LLLGTPALSV VGTFGAALTV GLKRGGLLLS LLVLPLYVPT LIFGAEVARR 180
  181 GAAGMEVATP LLMLAGITAA VIALLPFASA AVLRVNLR

Type	Start	End	Confidence
Cytoplasmic	1	9	0.99
Transmembrane Helix	10	33	0.89
Non-Cytoplasmic	34	41	0.76
Transmembrane Helix	42	64	0.87
Cytoplasmic	65	95	0.90
Transmembrane Helix	96	117	0.87
Non-Cytoplasmic	118	123	0.73
Transmembrane Helix	124	148	0.87
Cytoplasmic	149	155	0.78
Transmembrane Helix	156	175	0.93
Non-Cytoplasmic	176	190	0.76
Transmembrane Helix	191	213	0.90
Cytoplasmic	214	218	0.79