YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56678911, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISTRLNAL WEYANPRKFL ALTERVLPAL WVLTAITLVG GLVWGFFFTP DDYKQGSTVK  60
   61 IIYIHVPAAF LATSVWFMML VTSLVWLIRR HHVSALAARA AAPVGTVMTL IALITGAIWG 120
  121 QPMWGTWWEW DPRLTSFLVL FLFYLGYMAL WEAIEDGDTA ADLTSVLCLV GSVFAVLSRY 180
  181 AVYFWNQGLH QGASVLRAGA VSGTDTEEKV SNVYAYPLLL CLLGFGLLFV TLVFYRTGTE 240
  241 IRARRIKALI ARERANG

Type	Start	End	Confidence
Cytoplasmic	1	26	0.96
Transmembrane Helix	27	48	0.94
Non-Cytoplasmic	49	63	0.92
Transmembrane Helix	64	88	0.88
Cytoplasmic	89	95	0.94
Transmembrane Helix	96	119	0.87
Non-Cytoplasmic	120	133	0.82
Transmembrane Helix	134	151	0.96
Cytoplasmic	152	162	0.77
Transmembrane Helix	163	183	0.94
Non-Cytoplasmic	184	213	0.97
Transmembrane Helix	214	237	0.90
Cytoplasmic	238	257	0.97