YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56678778, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWAALLSLIV FCLYGAAIVC AVQAARTART PQGAVGWVVF LLTLPWASVP LYMFLGHHRF  60
   61 HGYRIARRES ERVVAGLRAH ADATAPDPDR VMVNTRPFEK IAHMAVSRGN GARLLVDGEA 120
  121 TFAALFAALD AARHYVLIQF YIVRDDDLGL ELRDRLIAAA QRGVKVRFLT DAIGSYGLSD 180
  181 NYIEDLRAAG IDIANPRKQR GPNTRFQVNY RNHRKTVVVD GQTGFIGGHN VGVEYLGQDP 240
  241 VMGRWRDTHV QITGPSVLQL QLVFAEDWHW ARGEDLLDLL SWETRLDPQD ADALIVATGP 300
  301 GDRTESGAMM FFAAITAAER RCWIASPYFV PDLDILAALK HAALRGVDVR LLVPDEADHT 360
  361 IPWLAAFAYF DEVREAGVRV MRYTDGFLHQ KVFVVDDTIA AVGTTNLDNR SFRLNFEAMA 420
  421 LFFDATVAGQ VTAMLEHDFA SSTELTRSLA AQPVFIRYGA PLARLFAPIL

Type	Start	End	Confidence
Signal Peptide	1	24	0.86
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	470	0.91