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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56696954, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRSQNGPF LSLSEWRKTR KARNIGTLGL VVLGPALTVA TYLVTGPFDL GAGSTTLRLI  60
   61 LLADLVYILA LAALVLSQVG RLVAARREKS AGSRLHLRLI GVFTLLALIP TITVAIFAGL 120
  121 TLNIGLEGWF SDRVRNVVGS SLAAAEAYEQ EHREGLTQDA RALARYLDQA RTLNFFISDA 180
  181 ELRGVLAQGQ GQIQRGLREA YVVDGIGEIR ARGDRSYQFD YEQPEPEQFR AAQTNGHVII 240
  241 QDWDNNEFRA LVMLQAYPDR YLYVSRVVDG EILNLLDDTK ETVHLYQQLE NERGRVLFEF 300
  301 GLLYLGFAVI LILAAVWLGL WFAERLSRPV GRLTTAAQRV GGGDLGVQVP EEPGDDEIAM 360
  361 LGRYFNQMTR QLKGQRDTLL ENTHQIERRR RLFDSVLSSV TSGVVGLDSQ GKVTFVNRSA 420
  421 ERLLDWSGDE QSLDLAVAVP EFVSLFESLV AAGQETVQAE IKVTRKGQLE NLLVRMSTRR 480
  481 GEDDTLEGYV IAFDDVTDLV SAQRMAAWGD VARRIAHEIK NPLTPIQLSA ERIKRKFSRK 540
  541 LDEEDCDSLE SMTDVIVRQT NDLRRIVDEF SKFARMPEPD RHEEDLTRLV RDAVLLQQTG 600
  601 QPDVRVRADL PEAPLMGNVD ATMLSQALTN LIKNAGEAIE TLVKKGAPEG LAPEIRVTLT 660
  661 GDAEGSQITI ADNGIGLPED RARLFEPYVT TRDEGTGLGL PIVKKIIEEH GGTLHLEDAP 720
  721 VFDGQDHFGA MAVIRLPGYD PASRTAMQRQ AARNKAKAGP T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle