YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696843, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTREYRQTVY APPAGAVDLL LIRHGESQPA RPGEPFPHVD GQGDPALHPE GEAQAHAVGT  60
   61 RLKGEPLAAI YVTTLRRTHQ TAAPLAAHLG LAPLVEPDLR EVFLGDWDRG EYRIRAANDD 120
  121 PAFLRARERQ EWGEIPGAET TAQLHARVRA GLLRIAARHP DQRIAAFVHG GVIGAAMAMA 180
  181 SGAEPFAFHG AANGSISRLV IQGERMVVRG FNDVAHLS

Type	Start	End	Confidence
Cytoplasmic	1	163	0.79
Transmembrane Helix	164	183	0.77
Non-Cytoplasmic	184	218	0.86