YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56678427, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNKMLSGAV AAALTVSFVG EAGATEWNVS VWGKRRAFTE HVEKLAELVS EKTGGAFTIN  60
   61 VSYGGLSKPK ENLDGISIGA FEMAQFCAGY HADKNRAITV LELPFLGVNT LAEEVAVSNA 120
  121 VYAHPAAQQE MAQWNARLLM TSPMPQYNLV GTGAPRDELA EFEGMRVRAT GGLGAAFSAV 180
  181 GGVPTSVPAT EAYNAMESGV VDTVAFAQHA HLSFGTINKA DWWTANLNPG TVNCPVVVNI 240
  241 DAYEALSDDE RAALDSSVDE AIAHYLTNYG ALLKKWDDVL AEKGVEKVMI SDAVLEEFRA 300
  301 KVAGPISAKW VEDMTAQGLP GQELLDLVHA TLKAARGS

Type	Start	End	Confidence
Signal Peptide	1	24	0.96
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	338	0.99