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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56696672, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRKKTNGVA RRPQRNSILS QVGDSHVDRR AFLRGSGLAI GGLAAISATG GTVTQASAQT  60
   61 AAGSAVETVK SVCTHCSVGC TVVAEVKNGV WIGQEPGWDS PFNLGAHCAK GASVREHAHG 120
  121 ERRLKYPMKK EGGEWKQISW EQAIDEIGDG MMKIRAESGP DSVYWLGSAK HNNEQAYLFR 180
  181 KFAAYWGTNN VDHQARICHS TTVAGVANTW GYGAMTNSYN DIHNSKAIFI IGGNPAEAHP 240
  241 VSLLHVLKAK EQNNAPLIVC DPRFTRTAAH ADEYVRFRPG TDVALIWGIL WHIFENGWED 300
  301 KEFIRTRVWG MDQIKAEVAN WTPEETERVT GVPGSQLKRV ARTMANNRPG TVIWCMGGTQ 360
  361 HTNGNNNTRA YCVLQLALGN MGTSGGGTNI FRGHDNVQGA TDLGVLSHTL PGYYGLTAGA 420
  421 WAHWARVWGE DLDWLKGQFA SIKDKDGKDK PLMNESGIPV SRWIDGVLED PANMDQDNNV 480
  481 RAMVLWGHAP NSQTRGPEMK TAMEKLDMLV VIDPYPTVSA VMHDRTDGVY LLPACTQFET 540
  541 RGSVTASNRS LQWRDKVVDP LFESLPDEVI IAKFANKFGW ADRLFRNIEM DDAETPNVES 600
  601 ITREFNAGLW TIGYTGQSPE RLKSHMANQH TFDRTTLQAV GGPNDGEYYG LPWPCWGTAE 660
  661 MGHPGTPNLY DMSKPVAEGG LCFRARFGVE RDGDNLLAEG VSNPGAEIQD GYPEFTMQML 720
  721 MDLGWDGDLT GEERAAIDAV AGPKTNWKTD LSGGIQRVAI KHGCAPFGNA KARAVVWTFP 780
  781 DPIPLHREPL YTNRRDLVAD YPTYEDRHAY RLPTLYASIQ KNDFSKDYPI ILTSGRLVEY 840
  841 EGGGEETRSN PWLAELQQDM FVEINPRDAN NLGIRDGQQV WVEGPEGGKV KVMAMLTERV 900
  901 GAGVAFMPFH FGGHFQGADL REKYPKGADP YVLGEASNTA QTYGYDSVTQ MQETKATLCK 960
  961 ISAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle