YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696648, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPARFTTAEG RHMLYRASHL WASVELVCAA ALAASVTGLI LLNVVTRAAG NAIYWVDEAA  60
   61 IYAMVWMTFL AASAAIHFRS AIAVTLVNEM LGSHSARLLE RVVDLVLFLF ACLMVWICLR 120
  121 WFMPLELMRA GWDVKAFQGQ TFNFIYAEPT NTLGLPKVWV WLVMPLFTLG ALLHSAANLI 180
  181 NPGRHPEAEA AQ

Type	Start	End	Confidence
Cytoplasmic	1	20	0.93
Transmembrane Helix	21	42	0.96
Non-Cytoplasmic	43	58	0.90
Transmembrane Helix	59	81	0.89
Cytoplasmic	82	101	0.88
Transmembrane Helix	102	123	0.94
Non-Cytoplasmic	124	157	0.95
Transmembrane Helix	158	180	0.86
Cytoplasmic	181	192	0.94