YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56678347, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEFHDRMLS LGLARVAEQA ALASASLIGR GDEKAADQAA VNAMREQLNL LDIAGVVVIG  60
   61 EGERDEAPML YIGEEVGTGN GPGVDIALDP LEGTTLTAKD MPNALTVIAM GPRGSMLHAP 120
  121 DVYMDKLAIG PGYAEGVVSL DMSPRERVEA LAAAKGCKPS DITVCILERP RHEAMIAEVR 180
  181 ETGASIRLIT DGDVAGVMHC AEAETTGIDM YMGSGGAPEG VLAAAALKCM GGQIFGRLLF 240
  241 RNDDERGRAA KAGITDLDRV YTRDEMVTQD VIFAATGVTG GSLLPRIKRE PGWVETTTLL 300
  301 MRSKTGSVRR MSYRTPV

Type	Start	End	Confidence
Signal Peptide	1	23	0.63
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	317	0.99