YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AROB_RUEPO
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKTVHVALG ARSYDVEIGP GLIAEAGARI APLLARKRVA VLTDETVAAL HLEALREGLA  60
   61 AGGVTMEALA LPPGESTKGW PQFERAADWL LDQKVERRDV VVAFGGGVIG DLAGFAAAVL 120
  121 RRGVRFVQIP TSLLAQVDSS VGGKTGINAS HGKNLIGAFH QPSLVLADTA VLGTLTARDF 180
  181 LAGYGEVVKY GLLGDAAFFD WLEGQGPALA AGDMAARVEA VTRSVQMKAD IVARDETEQG 240
  241 DRALLNLGHT FCHALEAATG YSDRLLHGEG VAIGCALAFE LSARLGLCSQ EDPSRVRAHL 300
  301 KAMGMKTDLT DIPGDLPTAD VLVDLMAQDK KVVDGQLRFI LARGIGQAFV TSDVPREAVL 360
  361 TVLEDALASC

Type	Start	End	Confidence
Cytoplasmic	1	99	0.52
Transmembrane Helix	100	120	0.52
Non-Cytoplasmic	121	370	0.96