YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696485, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIAIVGCGA MGSIYAARLA EAGHQVLAVD MWAEHVAAIN AGGLRVDGPS GTLLSRQVEA  60
   61 MEDLTWAGPC DLYILATKAA GVEPAARAIA ATLPAHALVL TIQNGLGAGE RIARHLPADR 120
  121 VLLGVAEGFG AAMVGPGHAR HTAMKLIRLG VMTGGDDPRL EQVAGIWRSG GFEVETFADI 180
  181 DRLIWEKLLC NVTLSAPCTA FGCTVADLRA DPERWAVALG CMAEAFAVGR AHGVAFSFDN 240
  241 PVAYVTAFAE RVGAAKPSML QDHEAGRRSE LEAINGAIPP LGAALGIATP YNETLCAVIR 300
  301 AREAAFGGER T

Type	Start	End	Confidence
Signal Peptide	1	16	0.91
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	311	0.98