YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696432, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFREIAAN DPGPTGRMKN MKTFTTALAT GVLALCPLAA LADSSDPIVI PIHNWSSQIV  60
   61 MSNVVGQIFE EMGVAVEFVT TDSQAVYESV RLGDVTLELE VWEGAFGASF RAALEKGGIV 120
  121 DVGDHDAVTR EDWWYPMWTK DACPGLPDWK ALNDCAAVFA TAETGDKGRY LDGPVDWLKH 180
  181 GKERVEALGM NFEVINAGSA AALWAEIGAA EADKRPVVVF NWTPNFAEAV WPGEFVEFPE 240
  241 WVDGCDKDPA VGPNPDALYD CGNPATGYLK KAAWEGMEAK WPDAYAVLTR ISFTNPQIAE 300
  301 MAKLVDVDEM EPDEAAEAWL EANEDVWRPW LDG

Type	Start	End	Confidence
Signal Peptide	1	42	0.91
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	333	0.99