YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696400, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMARAGTLG AALAVLLLGA GLPAWAQTRC GDHVPQARPQ NAGRDIVGAD LDAIQERGWI  60
   61 AFAAYEDFAP WSWEENGSVR GVDIELGRLI AEELGVEARF TLVAAGENLE ADLRNWVWKG 120
  121 PIVGGRVANV MLHVPYDSNF ACRVEQVVFT GQYHVERMGI AFGRAEYPED KPVPAYFRFD 180
  181 TVGVENDSIA DFYLTAFPGG QLRANIRRYP HMGAAMAGLA TGEVKTVMGP LAQLEHGLTP 240
  241 ELDVHSPPLP GFATGSWTVG VAVHFAYRPL AYAVDDAIVA GIGDGRIGEI FGAYGLTFSP 300
  301 PELR

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	304	0.99