YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696349, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIFSGLSRK ATYLMAAAAL AVMAAPMSAK AEDRVSAVHA FPEFLVYTKT FLAMVADINE  60
   61 RGKGIVQIDV RGGPEAIGMF EQPAAVRDGV VDMVHTPGSF YGANVPEIDA MVASRVTPME 120
  121 ARANGGAALM DKAHQERFNV RHLGWVDGGI KFHIYMNSEP KFRDDGILDL TGVKLRDNPI 180
  181 YHAFFEQLNA TTASMPATEV YSALEKGVVD AAAWTEIGIP QLKWNEFLKY RVDPTFYNTD 240
  241 IGVIFNLDAW NALSPESQKL IQDVVIEWEG KSYADRQAEV AADAKTLADG GMSFVSHSAE 300
  301 AGETYRKMAD DSAWARMYER IDGGGAGAET YMALRKAYAL AE

Type	Start	End	Confidence
Signal Peptide	1	31	0.98
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	342	0.99