YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696348, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRLIDRICD LLAILAGIYL VGIMFGIVIS ALARTLNLSG SWSSHIFTFT EFGLLYIVMA  60
   61 ASPWLVRHRG HVFIELLSAA LPRRMQRSYS RAISALCVVI CLTLVWYTWG ATARAWRFGD 120
  121 AEMRSLDMPK YLLLGAMPIG FGLMAAQFLR FVFGPVTMHT GEAGVHE

Type	Start	End	Confidence
Cytoplasmic	1	10	0.91
Transmembrane Helix	11	33	0.93
Non-Cytoplasmic	34	45	0.83
Transmembrane Helix	46	66	0.91
Cytoplasmic	67	87	0.92
Transmembrane Helix	88	110	0.91
Non-Cytoplasmic	111	130	0.93
Transmembrane Helix	131	153	0.90
Cytoplasmic	154	167	0.95