YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696339, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKRVLSLSV WLPGLLASAA LFVLMVMTFA DVLLRSIFNA PIEVAADLTR LLMAVMVFSV  60
   61 MPVLSGKNAH VSVDLLDGPF RRLRLSRWRD AAVCLFCGII LFWPASRVYD LAERSRSYGD 120
  121 VMEYLRLPLH YVGWFIALLT LVTAVVLVVR GVLLLVAPRL AGGAS

Type	Start	End	Confidence
Cytoplasmic	1	9	0.82
Transmembrane Helix	10	30	0.90
Non-Cytoplasmic	31	47	0.82
Transmembrane Helix	48	66	0.90
Cytoplasmic	67	87	0.82
Transmembrane Helix	88	106	0.92
Non-Cytoplasmic	107	130	0.90
Transmembrane Helix	131	154	0.90
Cytoplasmic	155	165	0.90