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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LCDH_RUEPO
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAAIIGGG VIGGGWAARF LLNGWDVRVF DPDPEAERKI GEVLANARRS LPGLSDMPLP  60
   61 PEGKLSFHAD LGEAVTGAAW IQESVPERLD LKLKVYRSIQ EACDPGAILG SSTSGFKPSE 120
  121 LQEGALRPGQ IVVTHPFNPV YLLPLIELVT TPENSPEMIE RAKEIMRGLG QFPLHVRKEI 180
  181 DAHIADRFLE AVWREALWLV KDGIATTEEI DEAIRMGFGI RWAQMGLFET YRVAGGEAGM 240
  241 KHFMAQFGPC LSWPWTKLMD VPEFTDELVD LIAGQSDAQS GHHTIRELER IRDNNLVGMM 300
  301 RALKAQNWGA GAVLNKHDAA LKPKALPDLD TADLTQPILT LSRAVPLDWT DYNGHMTESK 360
  361 YLEAFANSTD RFMEIIGCDA DYIAAGGSYF TAETHIRHLD EAHAGARIRV ETQMLLGQGK 420
  421 KLHLFHRMYE GDKLLATGES FLLHVSLETR KPCAPSPEIE AAMARIAEAQ AGLSYPEGAG 480
  481 SAIRKPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle