YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56678031, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVVKWAVR LLALAVVAGA VVFFGFLPAY VEDTSNNVID HAPYPVSERA AALHKELIVG  60
   61 DWHADPLLWS RDLSQRGKRG QVDVPRLIEG NVALQVFTAV TKSPAGQNYD SNSAEAFDNI 120
  121 TLLAVGQLWP LRTWTSLRER AIWQAEKLHR VEAQADGRLK IIKTAADLED VLAAKARGEA 180
  181 IVGGILGIEG AHPLEGELAN LDPIFDAGHR VYGLQHFFDN ELGGSLHGEA DTGLTEFGRA 240
  241 VVAELARRPV IIDLAHSSQQ VARDVLAMTD MPLVVSHGGL HGHCPVKRNF PDDLMREIAA 300
  301 TGGVIAMGYW AEVACDDITP TGIARMIVKA IETVGADHVS LGSDFDGSVE TAFDTSELAA 360
  361 LTSALLDAGV AEDQIRKVMG ENMVRVLRAR LR

Type	Start	End	Confidence
Signal Peptide	1	29	0.57
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	392	0.99