YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696264, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTRPGIAAP SEPVMSCHLT FRSVGLFGFG AFGRLIATHL TPHLPCLVHD PALPDGANLP  60
   61 AGLSIASQAE AAGCDLVILA MPVAGIAEAC RAIAPHLRPG AVVADVGSVK MTPAAIMQAT 120
  121 LPGHVALIGT HPLFGPQSAR HGIAGHKIAL CPLRGRAHLP VAAFLRARLG LRVILTTPEA 180
  181 HDREAATVQG LTHLIAQAMN RMGPLPDRMT TASFDLLKQA VEMVRHDPPG VLAAIESANP 240
  241 FAPRVREEFL GLIEGLDRAY AGRD

Type	Start	End	Confidence
Cytoplasmic	1	18	0.71
Transmembrane Helix	19	38	0.72
Non-Cytoplasmic	39	264	0.64