YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56677976, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPPPQRQRH ICPVPALAAA LISPHRPAPR ACPMAIAAIS CITCGDDTYL KVRDPTMIRP  60
   61 LIAVLSLFYL ISSAALAQQS ADEVVWVQIE AQPNLRTAQE RAQTYAADLS DVAGFSLGGG 120
  121 WYGIVLGPYL REDAEQVLRV YRAERRIPGD SFIALSGALG QQFWPVGSDL LNRGAAVAPV 180
  181 EQTAPEPVAE ATPQVQPEPA DETPAQARRS EQALSREERQ ALQIALQAAG FYNAAIDGAF 240
  241 GAGTRRSMAD WQGFNGFEAT GVLTTRQRKV LMDQYNAPLI STGMARHRDT AAGIEMDLPL 300
  301 GVVRFSRYEA PFAHFDASGE LGAQVLLISQ PGDKATLYGL YDIMQTLEIV PLDGPRERGS 360
  361 DSFTLEGRGN GIVSYTEAAL SGGEIKGFTL IWPTGDEDRR ARVLAAMRAS FARTDGVLDP 420
  421 AAGGDAVQSV DLVSGLEIRK PRLSRSGFYV DGKGTVLTVA EAVQGCTRVT LDGSYGAQVV 480
  481 DRDAGLGVAV LRPEQALAPM VVAGLGQEMP RLGADITVAG YSYEGILGAP TLTFGTLDDV 540
  541 KGLRGETELA RLGLMAQTGD AGGPVIDDQG TVVGMLLPAP ATGQQLPRGV SFAAKAQALR 600
  601 DVLSAAGMGA QQAETAGRIT PDELNRRASG MTVLVSCWD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle