YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696189, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVVVIGAGI VGASIADQLA ARGARVTVID RAGPGAGASG MSFGWINAAA SEDDTYFRFR  60
   61 LAAVARFRAL CDRLDLSDAV TWNGCIWWED AGEAFETHLE AMARWGYDVT LIGADDFARL 120
  121 EPNVANPPER AIWCPSEGAA EPDKVARALL RRAATNGARL ILGREVTGLM RRGERVTGID 180
  181 TDLCPMAADL VVVAAGIRSG ALTGLPMQNK PGLILRTAPI APVISRIIMS SDIHFRQASD 240
  241 GRLYLGEIFS GGIATETLDF ASGLIDELMT RLRNRLPGVE GLQLEQAALG TRPVPADGLP 300
  301 AIGPVPGSEG LYLATMHSGV TLGPLVGELV AREVLEQDSD PLLAPYRPSR LF

Type	Start	End	Confidence
Signal Peptide	1	20	0.68
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	352	0.98