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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56696138, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAPQLRQP DIETRVARGW RGLSLVWLVP VVAVAGALAL VWQSYSNRDI PIRIEFADAT  60
   61 GIEVDKTEIR FREVSVGRVS GMRFSEDLSR VIVEAEIHRE LERYLDSDAR FWRVTARVGP 120
  121 GGISGLNTLL SGAYIAADWD AVEGEAARDF VAEAEAPAVP PGTKGLAVVL IAPDSGSVSV 180
  181 GAPILHKGVQ MGKIAAVRYD ALSGSVLLTG FIEAPNDKLI NSATRFWNVS GAGLELGEGG 240
  241 IQLKVDSLAS LLQGGVAFDT AMSGGEALGK RPIFDLYATE DSARDSLLGD SLQATVEVMS 300
  301 SFDGSVRGLK LGSEVVFRGV KVGQVRHLSA EIDESVEGKP DIRMQVIYTI EPGRLGLHDV 360
  361 STPDDTLSLL ATMVARGGVR AQLMPASFFS GGLVVQLQEN PDAPAATLDR EATPFPIMPS 420
  421 LPTPADTLAV ASQNVLDRVA ALPVEELMQR AIETLENVNT ILADGDTRRI PADLRDMLGN 480
  481 VNAVAGSESL RNLPEDLRQA LASVNAVLAH FEEEEGAQKL VAALEELRTA ATGISAASAD 540
  541 LPALVRDIDA LVAKADALPL EQVVTSADQV LQTADTLLRS DDVERVPAAL NAALAQAEQT 600
  601 LVSIREAAGS VNSTLSTFEE KKVAQTLVDA LGDMRTAAAN VETASAELPQ LVADIDRLIA 660
  661 TANALPLADV TASADRVLQS ADAFLRNEDM DKVPGALAGA LEEAQRALEE LRQGGAVENL 720
  721 NRTLQTASTA ADSVALAVQT LPDLAARLDA LADSAEATIG AYGPGSPVNR EVQAAIGDLR 780
  781 ATVRSLNALV QAIRRKPNSL LVGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle