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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56677811, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRTPLRPLA RVLHARAKGE NPDLIERENI RLRHEEMQDR SRARAEGRLL VLGVFFFCAF  60
   61 SVVGARMGML ASSEAQEPLA SATGATIAAQ RADIVDREGR LLATNFETHS LYAQPPLMVD 120
  121 PVAAAEGLVR IFPDLDKDRL VRDFSGKRKF IWIKKRISPE QKQAVHDIGD PGLLFGPREM 180
  181 RLYPNGRLAA HVLGGAGFGR EGVDAAEVIG VAGVEKQFDG YLRDPANGAK PLQLSLDLTV 240
  241 QAAMEQVLDG GMKIMSAKGA SAVLMDVHTG EVVAASSLPS FDPNDRPRPP TSGFDPSDSP 300
  301 LFNRYVQGVY ELGSVFKIFA AAQAVDLGLV NSDTIIDTSG PMRIGKFPIG EFNNKNYGKI 360
  361 SIADVIVHSS NRGTGRLALQ IGAERQQAFL NSLGMFDPTP FEIVEASGGQ PLKPKTWGEL 420
  421 STVTISYGHG LSTSPMHLAA GYAAIANGGQ YVSPTVLKQK GPQYGPRVMS ENAARQARAM 480
  481 LRKVVTSGTA SFGEVPGYQV GGKTGTADKP KPRGGYYDDK VIATFASLFP ASDPKYVLVV 540
  541 TLDEPSILAY GEKRRTAGWT AVPVAAELIG RVAPLLGLRP QLEPGQGAGY TLTSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle