YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UEHB_RUEPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQTHESALP GFLGMLDSAI SRIESFLLAM GVLLMAANTV ANVVGRFVLG NSIFFSEELN  60
   61 RILIILITFA GISYAARNAR HIRMSAVYDL LPARLRKGMM VVISVVTAAF MFLLCYYAAK 120
  121 YIGSQASRGR VLPALQIPVW VILIWVPAGF FMTGAQYLLT AVRNLTSSGI YLSTHVQEGY 180
  181 EDAEEIEI

Type	Start	End	Confidence
Cytoplasmic	1	24	0.88
Transmembrane Helix	25	45	0.87
Non-Cytoplasmic	46	58	0.80
Transmembrane Helix	59	78	0.91
Cytoplasmic	79	97	0.90
Transmembrane Helix	98	119	0.93
Non-Cytoplasmic	120	136	0.85
Transmembrane Helix	137	160	0.86
Cytoplasmic	161	188	0.95