YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56696028, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLRNRRIV HPIGSTGRTE MKRVGLGLAL VALAGGVNAA EMGASDEPIK LAINEWTGQH  60
   61 VTTHVAGEML RAAGYKVEYV TAGMMNQFQA LADGDIHATL EIWSSNVSDE YAKKVAEGTV 120
  121 TEIGDLGLNA REGIAYPAHV ADLCPGLPAW EALKDCAQVF ASAETLPMGR LVDYPADWGT 180
  181 PGADRMTGLD LPIKAVPAGS EGALIAELRA STERKSPLLI TFWQPHWAMS AYDVKFIDLP 240
  241 PGEEACFNDA SWGPNPNAVN DCDFSPSRIF KASWSGFAEK WPAAHEILSN YQLSVEAQQP 300
  301 MMGAIDVDGG KVEEVVAAWM TENEGSWRPV VDAATK

Type	Start	End	Confidence
Signal Peptide	1	39	0.99
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	336	0.99