YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677683, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHTAIDLFC GAGGLSAGLE MAGFTVLAGN DIFDAAGKTF EATHPRAKFI PGPIEDLTIE  60
   61 HLLEVTGLKP GELTVLAGGP PCQAYSVYNH QRGMHDERAT LFKEYLRIVD GLRPEWIVME 120
  121 NVTGIYSIGG GEAVAAIKSE LAALGYEVEE AVLRAEEYGV PQERRRVVFI GNRVGVPISH 180
  181 PEPTHGPGRS MPFVTIKDAI GDLPALENGE AKPDAAYLDG KPTSYQRQMR GNATVITNHA 240
  241 APRLGQVNMD RLPHIPPGGS WRDIPFDLLP AGMKRAKRSD HTKRYGRMTW DGLSCTVLTK 300
  301 CDIHWGAYIH PEQDRAISVR EAARLQAFPD WFEFHGSRTD QYVQVGNAVP PVLGKAIGDH 360
  361 LMGLIKARSS KAA

Type	Start	End	Confidence
Signal Peptide	1	22	0.60
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	373	0.98