YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677636, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESSGKHSP SRRRFLTSVA AAGAGAVAAG AARAAGPDPL ITEVQDWARA TGDGVDATPY  60
   61 GLPIEYEGDV IRRNVEWLTA DTISSINFTP IHALDGTITP QGCAFERHHS GAIALKKEDY 120
  121 RLMINGLVDT PLVFSYADLE RFPRENHVYF CECAANSGME WAGAQLNGAQ FTHGMIHNME 180
  181 YSGVSLRTLL EEAGLSAAGD LKDKWVYVEG ADASSNGRSI PMEKALDDVL VAFKANGEAL 240
  241 RKEHGYPVRL VVPGWEGNMW VKWLRRIEVM DGPVESREET SKYTDTLEDG TSRKWTWVMD 300
  301 AKSVVTSPSP QAPITHGAGP LVITGLAWSG RGAITGVDVS IDGGKSWQPA RLAAPGQDKA 360
  361 LTRFYLDTNW DGSEMLLQSR ARDSSGYVQP TKAQLREVRG LNSIYHNNAI QTWWVKANGV 420
  421 AENVEVS

Type	Start	End	Confidence
Signal Peptide	1	34	0.97
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	427	0.99