YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677634, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVRAMTAIA ALLAAPLAAV AGPDSDELVV NGEINMVTQT EAPAHLDGAL SELYSGWRFR  60
   61 SDETQALQMD DFDNPAMVFV DQAQEAWDTA DGTEGKSCAS CHGDAADSMA GVRAVYPKWN 120
  121 EAAGEVRTLE AQVNDCRENR MGAKAWKYDG GDMASMTALI SVQSRGLPVN VAIDGPAQAT 180
  181 WEMGKEIYYT RYGQLELSCA NCHEDNYGNM IRADHLSQGH INGFPTYRLK NAKLNTSHAR 240
  241 FKGCVRDTRA ETFNPGSPEF VALELYVASR GNGLSVEGPS VRN

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	283	0.99