YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677574, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRNDAALE FLQTRRSRPA KTLSAPAPSR EELLPILTAA ARSPDHGKLE PWRFVVLEQG  60
   61 AMARLADLAE ARGRALGKPD EDIAKGRAQF DQGILAVAVI EVQKDSPKIP AIEQTYSAGA 120
  121 VCLAMLNAAL AAGWGANWLS GWPSHDRIFC AEGLGLESHE RIAGLIHIAT ETSAPPDRPR 180
  181 PDLEAITTWV TA

Type	Start	End	Confidence
Cytoplasmic	1	115	0.65
Transmembrane Helix	116	136	0.72
Non-Cytoplasmic	137	192	0.87