YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56695795, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVKVGIIM GSQSDWPTMK GAAEILDELG VAYEARIVSA HRTPDRLWDY GRAAVGRGLQ  60
   61 VIIAGAGGAA HLPGMMASKT RVPVIGVPVQ TRALSGVDSL YSIVQMPKGY PVATMAIGAA 120
  121 GAANAGLMAA GILALQDAGL AERLDAWRAA LSASIPEEPV DE

Type	Start	End	Confidence
Cytoplasmic	1	53	0.92
Transmembrane Helix	54	75	0.79
Non-Cytoplasmic	76	111	0.86
Transmembrane Helix	112	135	0.86
Cytoplasmic	136	162	0.84