YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56677505, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFTTRPEIA GTFAVATSTH WIASAVGMGV LERGGNAFDA AAAMGFVLQV VEPHLNGPLG  60
   61 DMPMLIKPAG DVVPTMVCGQ GTAPAGATIA HYRSEGLTRI PGSGLLATVI PGAFDAWMLM 120
  121 LRDYGTLPLR DILEPAIHYA RAGHPALPRV AATIAGLAEF FRAEWPSSHE TWLPGGSAPR 180
  181 AGALMKNPAL ADTWTRLLAE SETVSGREAQ IEAARAAFYR GFVAESIDRY LRHACVMDAA 240
  241 GGRRKGVLSG EDMACWQASY EAPISTRYKD WTVWKGGPWT QGPALLQSLH LLDGFDLDAI 300
  301 DLNGAEFVHL VSEAMKLSFA DREAYYGDPE HSDIPMSALL SARYGEARRG LIGERASTEQ 360
  361 RPGLVEGYES WVAAALRHAR EDYASAGGTG AGEPTMAHLS QRKGDTVHLD VIDRWGNMVS 420
  421 ATPSGGWLQS APVVPGLGMP LNSRAQMFWL EEGLPTSLAP GRRPRTTLSP SMARGPDGTE 480
  481 LAFGTPGGDQ QDQWQLIYFL RLVHGGLNLQ EAIDAPLFHT NHFQSSFYPR EVQPGHLMVE 540
  541 PALGEAAIAE LRARGHRVEV AEPWSVGRLT AASRLSDGTL RAAATPRLMQ AYAIGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle