YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677449, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVFGKWLGR ALLALILAAG VIGVWKWEEI NRLLAVNSLF NAEKIVANFS HMDAAFLTAP  60
   61 VARGNGPTSD LPHGAAYELP TGGTDWIEER AVTSLLVMKD GQIRFEEYYL GTSPDDRRIS 120
  121 WSVAKSYLSA LLGVLLEEGA IASIDDPVVK YVPQLKGSAY EPASIRNVLN MASGVTFDED 180
  181 YFDKNSDINR MGRVVALGGT LDDFAASFTD SFAAPGETWQ YVSIDTHVIG MVIRGATGRS 240
  241 VTDLLTEKIL APLGLERDGY YITDGAGVAF VLGGLNFTTR DYARFGQMIL QDGSYGGKQV 300
  301 VPAGWIAAST AASAPTAAGK IGYGYQWWIP VGAGPGEFLA RGVYGQYIYF DQPRGVMIVT 360
  361 TGADRGFRGE GVNEANIEMF RKIAQSL

Type	Start	End	Confidence
Signal Peptide	1	23	0.91
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	387	0.97