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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56695696, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQTTSLKI TGMSCAGCVG RVERALLAVP GVAEASVNFA TKTAQVHHDS PVAALTQAAA  60
   61 GAGYPAEVSE TTLTVEGLSC ASCVGRVERA LNAAPGVVEA QVNLATRTAR VSYVTGSTDP 120
  121 AALAAVSTAA GYAARPEGGA EDGGEEPSDE AAILKRQTLL AILLALPVFL IEMGGHMIPA 180
  181 LHHWIMATIG QQTSYLIQFA LTTVLLFGPG RVFYAKGFPA LLRGAPDMNA LVALGTGAAY 240
  241 GFSLVATFAP GLLPAGTANV YYEAAAVIVA LILLGRWLEA RARGRTGAAI EALVGLQPRH 300
  301 ARIERNGQPV EVEIADIQPG DTLLIRPGDR IPADARVLDG QSHVDESMIT GEPVPVTKSA 360
  361 GDTLVGGTVN GAGALRARAE KVGADTVLAQ IIRMVEQAQG AKLPIQSVVD RITLWFVPIV 420
  421 MGVAALTVLV WLAFGPSPAL GHALVAGVAV LIIACPCAMG LATPTSIMVG TGRAAELGVL 480
  481 FRKGDALQRL QEARVIAFDK TGTLTLGRPE LTDLTTADGF ERDSVLRLAA AVEAQSEHPI 540
  541 AEAITRAAEG DLLAAEAFES LTGLGARARV AGQDVLIGAD RLFDREGIAL GPLRETGAAL 600
  601 AAEGKTPLYA AIDGRAAAVL AVSDPVKPGT AEAIERFHRM GLSVAMITGD NTRTAQALAA 660
  661 KLGIDAVTAE VMPEGKVAAL DALRADHGAL AFVGDGINDA PALAHADTGI AVGTGTDVAI 720
  721 EAADVVLMSG DLRGVANALE VSRATMRNIR QNLGWAFGYN VLLIPVAAGV LYPFGGPMLS 780
  781 PVLAAGAMAL SSVFVVTNAL RLRRVRAALP ATRQAAAPAP AAAPAPAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle