YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56677424, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRDWIALDW GMTARRIWVM RGRDPLDEIV ETGPRAPDRA AILSLVAGRH AGQGVPVVAC  60
   61 GPLGPVRETV PCAPLSGGLW QIDLGDPRVL LHAVPGLAQT EPADMMQGDE TRIAGFLALN 120
  121 PDWDGVICLT GETSRWAHVS AGEVVSFRSF LSGAMLAALA GGTVLGRWLA APDLDKTAFE 180
  181 AAVADGLSRP EQMLARLWSA HAAATLQGLP AGIARARILG GLIGAELAAT RPFWLGQQLA 240
  241 VMGEGEMPRL YVDALGAQGA PATQADAARM TRAGLVAAWG AMTA

Type	Start	End	Confidence
Cytoplasmic	1	143	0.75
Transmembrane Helix	144	165	0.72
Non-Cytoplasmic	166	202	0.76
Transmembrane Helix	203	219	0.50
Cytoplasmic	220	284	0.64